Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PMS1P54277 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.31■□□□□ 0.2
PMS1P54277 TMEM14DP-201ENST00000422205 345 ntBASIC16.31■□□□□ 0.2
PMS1P54277 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PMS1P54277 RN7SL48P-201ENST00000579283 293 ntBASIC16.31■□□□□ 0.2
PMS1P54277 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.31■□□□□ 0.2
PMS1P54277 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 ECM1P1-201ENST00000604092 1279 ntBASIC16.31■□□□□ 0.2
PMS1P54277 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.31■□□□□ 0.2
PMS1P54277 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PMS1P54277 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
PMS1P54277 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PMS1P54277 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PMS1P54277 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 AL590440.2-201ENST00000641973 1595 ntBASIC16.3■□□□□ 0.2
PMS1P54277 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PMS1P54277 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 AP006294.1-201ENST00000415407 339 ntBASIC16.3■□□□□ 0.2
PMS1P54277 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.3■□□□□ 0.2
PMS1P54277 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.3■□□□□ 0.2
PMS1P54277 AL590640.2-201ENST00000457038 527 ntBASIC16.3■□□□□ 0.2
PMS1P54277 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.3■□□□□ 0.2
PMS1P54277 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.3■□□□□ 0.2
PMS1P54277 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.3■□□□□ 0.2
PMS1P54277 AC106820.3-201ENST00000561653 397 ntBASIC16.3■□□□□ 0.2
PMS1P54277 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.3■□□□□ 0.2
PMS1P54277 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 BX088702.1-201ENST00000610784 235 ntBASIC16.3■□□□□ 0.2
PMS1P54277 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 AC025048.6-201ENST00000634326 1161 ntBASIC16.3■□□□□ 0.2
PMS1P54277 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
PMS1P54277 KHSRPP1-201ENST00000427983 1768 ntBASIC16.3■□□□□ 0.2
PMS1P54277 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.3■□□□□ 0.2
PMS1P54277 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.3■□□□□ 0.2
PMS1P54277 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PMS1P54277 HSPA8P5-201ENST00000456928 2069 ntBASIC16.3■□□□□ 0.2
PMS1P54277 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 AP000593.2-201ENST00000542775 1433 ntBASIC16.29■□□□□ 0.2
PMS1P54277 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PMS1P54277 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PMS1P54277 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PMS1P54277 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PMS1P54277 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms