Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 AL360270.3-201ENST00000609118 1348 ntBASIC14.42□□□□□ -0.1
PDX1P52945 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 AC009093.2-202ENST00000620513 2079 ntBASIC14.42□□□□□ -0.1
PDX1P52945 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.42□□□□□ -0.1
PDX1P52945 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PDX1P52945 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
PDX1P52945 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 AL008707.1-201ENST00000422498 534 ntBASIC14.42□□□□□ -0.1
PDX1P52945 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.42□□□□□ -0.1
PDX1P52945 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 NUP210P1-202ENST00000504322 710 ntBASIC14.42□□□□□ -0.1
PDX1P52945 AC134698.3-201ENST00000523880 214 ntBASIC14.42□□□□□ -0.1
PDX1P52945 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.42□□□□□ -0.1
PDX1P52945 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.42□□□□□ -0.1
PDX1P52945 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.42□□□□□ -0.1
PDX1P52945 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 AF254983.2-201ENST00000612331 135 ntBASIC14.42□□□□□ -0.1
PDX1P52945 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.42□□□□□ -0.1
PDX1P52945 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 INE2-201ENST00000630399 1874 ntBASIC14.42□□□□□ -0.1
PDX1P52945 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDX1P52945 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDX1P52945 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 FKBP4P6-201ENST00000457486 1332 ntBASIC14.41□□□□□ -0.1
PDX1P52945 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDX1P52945 AC004899.1-201ENST00000424687 1714 ntBASIC14.41□□□□□ -0.1
PDX1P52945 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.41□□□□□ -0.1
PDX1P52945 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.41□□□□□ -0.1
PDX1P52945 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDX1P52945 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms