Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRCA2P51587 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRCA2P51587 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRCA2P51587 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BRCA2P51587 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 AC087481.3-201ENST00000602886 1894 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 DOC2GP-204ENST00000639052 2548 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BRCA2P51587 RN7SL128P-201ENST00000467883 305 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 AC020922.4-201ENST00000621389 339 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 LILRP1-201ENST00000444199 1370 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BRCA2P51587 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 IFNWP2-201ENST00000431203 580 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 ST13P19-201ENST00000442505 1124 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 RN7SL530P-201ENST00000485097 298 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 AC087203.1-201ENST00000532111 1181 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 AL132994.1-201ENST00000554098 400 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.07■□□□□ 0.16
BRCA2P51587 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.07■□□□□ 0.16
BRCA2P51587 AC254633.1-201ENST00000606790 345 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 AC005274.1-201ENST00000623460 802 ntBASIC16.07■□□□□ 0.16
BRCA2P51587 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.07■□□□□ 0.16
BRCA2P51587 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BRCA2P51587 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.07■□□□□ 0.16
BRCA2P51587 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BRCA2P51587 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BRCA2P51587 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.06■□□□□ 0.16
BRCA2P51587 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 EEF1DP7-201ENST00000580496 513 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 AL512324.3-201ENST00000619383 882 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.06■□□□□ 0.16
BRCA2P51587 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BRCA2P51587 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 CDK4P1-201ENST00000454213 828 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.06■□□□□ 0.16
BRCA2P51587 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.06■□□□□ 0.16
BRCA2P51587 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
BRCA2P51587 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.06■□□□□ 0.16
BRCA2P51587 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 DKKL1P1-201ENST00000400550 698 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 RN7SL602P-201ENST00000578326 324 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 RN7SL718P-201ENST00000581254 303 ntBASIC16.06■□□□□ 0.16
BRCA2P51587 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.06■□□□□ 0.16
BRCA2P51587 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.06■□□□□ 0.16
BRCA2P51587 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BRCA2P51587 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms