Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF144AP50876 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNF144AP50876 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF144AP50876 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNF144AP50876 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF144AP50876 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF144AP50876 KRT8P35-201ENST00000483942 1338 ntBASIC13.9□□□□□ -0.19
RNF144AP50876 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNF144AP50876 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 AC104581.4-201ENST00000623126 3052 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF144AP50876 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF144AP50876 INE1-201ENST00000456273 945 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF144AP50876 RN7SL837P-201ENST00000463010 287 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 AC106760.1-201ENST00000508690 800 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF144AP50876 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF144AP50876 AC132938.2-201ENST00000579188 680 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 AL591163.1-201ENST00000641757 987 ntBASIC13.89□□□□□ -0.19
RNF144AP50876 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF144AP50876 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF144AP50876 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF144AP50876 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF144AP50876 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF144AP50876 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF144AP50876 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF144AP50876 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF144AP50876 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 MIR5189-201ENST00000577370 114 ntBASIC13.88□□□□□ -0.19
RNF144AP50876 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF144AP50876 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.88□□□□□ -0.19
RNF144AP50876 AC103798.2-201ENST00000624292 632 ntBASIC13.88□□□□□ -0.19
RNF144AP50876 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF144AP50876 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms