Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 COX20P2-201ENST00000452636 358 ntBASIC15.68■□□□□ 0.1
RFC1P35251 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.68■□□□□ 0.1
RFC1P35251 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.68■□□□□ 0.1
RFC1P35251 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.68■□□□□ 0.1
RFC1P35251 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 BTNL10-201ENST00000595971 695 ntBASIC15.68■□□□□ 0.1
RFC1P35251 AC233724.13-201ENST00000598383 410 ntBASIC15.68■□□□□ 0.1
RFC1P35251 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 AC138466.3-201ENST00000619983 221 ntBASIC15.68■□□□□ 0.1
RFC1P35251 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC1P35251 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 AC011840.2-201ENST00000563063 1520 ntBASIC15.68■□□□□ 0.1
RFC1P35251 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC1P35251 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC1P35251 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.67■□□□□ 0.1
RFC1P35251 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC1P35251 AC138696.2-201ENST00000607376 223 ntBASIC15.67■□□□□ 0.1
RFC1P35251 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RFC1P35251 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 AGGF1P1-201ENST00000509500 2073 ntBASIC15.67■□□□□ 0.1
RFC1P35251 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFC1P35251 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC1P35251 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC1P35251 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.66■□□□□ 0.1
RFC1P35251 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms