Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VAMP1P23763 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VAMP1P23763 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 RNU6-673P-201ENST00000365084 104 ntBASIC12.64□□□□□ -0.39
VAMP1P23763 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.64□□□□□ -0.39
VAMP1P23763 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 AC025181.2-201ENST00000606994 802 ntBASIC12.64□□□□□ -0.39
VAMP1P23763 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
VAMP1P23763 AL645728.2-202ENST00000641679 227 ntBASIC12.64□□□□□ -0.39
VAMP1P23763 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VAMP1P23763 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VAMP1P23763 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.64□□□□□ -0.39
VAMP1P23763 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 AGGF1P1-201ENST00000509500 2073 ntBASIC12.63□□□□□ -0.39
VAMP1P23763 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 AOC4P-203ENST00000566825 2289 ntBASIC12.63□□□□□ -0.39
VAMP1P23763 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.63□□□□□ -0.39
VAMP1P23763 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VAMP1P23763 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.63□□□□□ -0.39
VAMP1P23763 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 AL049840.3-201ENST00000602669 611 ntBASIC12.63□□□□□ -0.39
VAMP1P23763 MIR7706-201ENST00000613747 67 ntBASIC12.63□□□□□ -0.39
VAMP1P23763 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 AC012617.1-204ENST00000586340 2305 ntBASIC12.63□□□□□ -0.39
VAMP1P23763 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.63□□□□□ -0.39
VAMP1P23763 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms