Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 FKBP4P6-201ENST00000457486 1332 ntBASIC12.77□□□□□ -0.37
TNFSF4P23510 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.77□□□□□ -0.37
TNFSF4P23510 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.77□□□□□ -0.37
TNFSF4P23510 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.77□□□□□ -0.37
TNFSF4P23510 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TNFSF4P23510 ST20-AS1-201ENST00000560255 4223 ntBASIC12.77□□□□□ -0.37
TNFSF4P23510 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.76□□□□□ -0.37
TNFSF4P23510 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.76□□□□□ -0.37
TNFSF4P23510 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 AC091951.1-201ENST00000512854 2465 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 MIR1202-201ENST00000408529 83 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 POM121L8P-201ENST00000417732 1281 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 POM121L9P-203ENST00000441984 1285 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 AC244107.1-201ENST00000442033 332 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.76□□□□□ -0.37
TNFSF4P23510 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 MIR6775-201ENST00000617557 69 ntBASIC12.76□□□□□ -0.37
TNFSF4P23510 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.76□□□□□ -0.37
TNFSF4P23510 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.76□□□□□ -0.37
TNFSF4P23510 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.76□□□□□ -0.37
TNFSF4P23510 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TNFSF4P23510 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms