Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH3P22223 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 TPM3P8-201ENST00000330554 643 ntBASIC14.66□□□□□ -0.06
CDH3P22223 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDH3P22223 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH3P22223 AC104457.1-201ENST00000401024 814 ntBASIC14.66□□□□□ -0.06
CDH3P22223 AC099336.1-201ENST00000417053 1171 ntBASIC14.66□□□□□ -0.06
CDH3P22223 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH3P22223 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 FAM21FP-201ENST00000426241 1131 ntBASIC14.66□□□□□ -0.06
CDH3P22223 GHSR-202ENST00000427970 912 ntBASIC14.66□□□□□ -0.06
CDH3P22223 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 CSF2RBP1-201ENST00000447905 391 ntBASIC14.66□□□□□ -0.06
CDH3P22223 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH3P22223 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 AC022616.1-201ENST00000518688 554 ntBASIC14.66□□□□□ -0.06
CDH3P22223 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH3P22223 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDH3P22223 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDH3P22223 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 CICP8-201ENST00000455800 2813 ntBASIC14.66□□□□□ -0.06
CDH3P22223 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 COL6A4P2-202ENST00000504443 2753 ntBASIC14.66□□□□□ -0.06
CDH3P22223 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CDH3P22223 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH3P22223 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH3P22223 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH3P22223 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH3P22223 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH3P22223 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDH3P22223 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH3P22223 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH3P22223 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 CNN2P8-201ENST00000421872 913 ntBASIC14.65□□□□□ -0.06
CDH3P22223 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH3P22223 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH3P22223 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH3P22223 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH3P22223 AC078819.1-201ENST00000547454 765 ntBASIC14.65□□□□□ -0.06
CDH3P22223 AC012085.1-201ENST00000548270 765 ntBASIC14.65□□□□□ -0.06
CDH3P22223 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.65□□□□□ -0.06
CDH3P22223 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDH3P22223 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH3P22223 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDH3P22223 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH3P22223 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.65□□□□□ -0.07
CDH3P22223 CICP17-201ENST00000418553 2377 ntBASIC14.65□□□□□ -0.07
CDH3P22223 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH3P22223 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms