Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AGGF1P1-201ENST00000509500 2073 ntBASIC15.01□□□□□ -0.01
HLA-DPA1P20036 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AC005912.2-201ENST00000619492 2400 ntBASIC15.01□□□□□ -0.01
HLA-DPA1P20036 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 BOLA2P3-201ENST00000404566 256 ntBASIC15.01□□□□□ -0.01
HLA-DPA1P20036 RN7SKP175-201ENST00000408472 289 ntBASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 FAM8A4P-201ENST00000435433 1213 ntBASIC15.01□□□□□ -0.01
HLA-DPA1P20036 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPA1P20036 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPA1P20036 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPA1P20036 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15□□□□□ -0.01
HLA-DPA1P20036 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPA1P20036 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 AC020910.5-201ENST00000623668 1865 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 INE2-201ENST00000630399 1874 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15□□□□□ -0.01
HLA-DPA1P20036 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
HLA-DPA1P20036 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 AC078819.1-201ENST00000547454 765 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 AC012085.1-201ENST00000548270 765 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DPA1P20036 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DPA1P20036 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPA1P20036 BX088702.1-201ENST00000610784 235 ntBASIC15□□□□□ -0.01
HLA-DPA1P20036 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPA1P20036 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPA1P20036 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AL354989.2-201ENST00000435838 1540 ntBASIC14.99□□□□□ -0.01
HLA-DPA1P20036 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AC006001.1-201ENST00000325130 474 ntBASIC14.99□□□□□ -0.01
HLA-DPA1P20036 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPA1P20036 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms