Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.29■□□□□ 0.2
CLTAP09496 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.29■□□□□ 0.2
CLTAP09496 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 AC007969.1-201ENST00000433675 447 ntBASIC16.29■□□□□ 0.2
CLTAP09496 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLTAP09496 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.29■□□□□ 0.2
CLTAP09496 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.29■□□□□ 0.2
CLTAP09496 RN7SL560P-201ENST00000577943 264 ntBASIC16.29■□□□□ 0.2
CLTAP09496 PPY2P-201ENST00000582808 702 ntBASIC16.29■□□□□ 0.2
CLTAP09496 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.29■□□□□ 0.2
CLTAP09496 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 FGD5P1-202ENST00000614866 2498 ntBASIC16.29■□□□□ 0.2
CLTAP09496 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLTAP09496 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CLTAP09496 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 LINC01101-201ENST00000622953 1884 ntBASIC16.29■□□□□ 0.2
CLTAP09496 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 AC015656.1-201ENST00000624209 3578 ntBASIC16.28■□□□□ 0.2
CLTAP09496 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 RN7SKP230-201ENST00000365642 335 ntBASIC16.28■□□□□ 0.2
CLTAP09496 RN7SKP175-201ENST00000408472 289 ntBASIC16.28■□□□□ 0.2
CLTAP09496 AC004945.1-201ENST00000416738 983 ntBASIC16.28■□□□□ 0.2
CLTAP09496 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.28■□□□□ 0.2
CLTAP09496 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.28■□□□□ 0.2
CLTAP09496 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.28■□□□□ 0.2
CLTAP09496 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.28■□□□□ 0.2
CLTAP09496 AP006547.1-201ENST00000563435 692 ntBASIC16.28■□□□□ 0.2
CLTAP09496 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.28■□□□□ 0.2
CLTAP09496 MIR4741-201ENST00000579822 90 ntBASIC16.28■□□□□ 0.2
CLTAP09496 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 AC011840.2-201ENST00000563063 1520 ntBASIC16.28■□□□□ 0.2
CLTAP09496 REXO1L6P-201ENST00000603433 1515 ntBASIC16.28■□□□□ 0.2
CLTAP09496 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.28■□□□□ 0.2
CLTAP09496 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 KRT8P4-201ENST00000509735 1454 ntBASIC16.28■□□□□ 0.2
CLTAP09496 AC003102.2-201ENST00000589195 1469 ntBASIC16.28■□□□□ 0.2
CLTAP09496 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLTAP09496 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.27■□□□□ 0.2
CLTAP09496 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.27■□□□□ 0.2
CLTAP09496 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms