Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.7□□□□□ -0.06
CAPN1P07384 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CAPN1P07384 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CAPN1P07384 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 AC005229.1-201ENST00000392885 409 ntBASIC14.7□□□□□ -0.06
CAPN1P07384 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CAPN1P07384 AC068587.3-201ENST00000526613 355 ntBASIC14.7□□□□□ -0.06
CAPN1P07384 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN1P07384 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 AC133552.6-201ENST00000613406 534 ntBASIC14.7□□□□□ -0.06
CAPN1P07384 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.7□□□□□ -0.06
CAPN1P07384 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN1P07384 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CAPN1P07384 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 AC079781.5-202ENST00000641784 3743 ntBASIC14.7□□□□□ -0.06
CAPN1P07384 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.7□□□□□ -0.06
CAPN1P07384 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN1P07384 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CAPN1P07384 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 MSTO2P-201ENST00000314835 1709 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 LINC01230-201ENST00000625222 3017 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN1P07384 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN1P07384 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 BCRP2-202ENST00000447763 634 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 BCRP6-201ENST00000510112 632 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 BCRP7-201ENST00000511549 544 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN1P07384 PTP4A1P2-201ENST00000546033 454 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN1P07384 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN1P07384 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 AL022328.1-201ENST00000610050 478 ntBASIC14.69□□□□□ -0.06
CAPN1P07384 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN1P07384 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CAPN1P07384 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN1P07384 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN1P07384 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN1P07384 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CAPN1P07384 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN1P07384 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CAPN1P07384 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN1P07384 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.68□□□□□ -0.06
CAPN1P07384 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms