Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.91□□□□□ -0.18
CTNSO60931 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CTNSO60931 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNSO60931 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNSO60931 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNSO60931 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTNSO60931 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTNSO60931 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CTNSO60931 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.91□□□□□ -0.18
CTNSO60931 TUBB1P2-201ENST00000422712 1306 ntBASIC13.9□□□□□ -0.18
CTNSO60931 TUBB1P1-201ENST00000503144 1300 ntBASIC13.9□□□□□ -0.18
CTNSO60931 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 AC015818.8-201ENST00000587907 1519 ntBASIC13.9□□□□□ -0.18
CTNSO60931 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CTNSO60931 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 SHC1P1-201ENST00000425230 1745 ntBASIC13.9□□□□□ -0.18
CTNSO60931 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.9□□□□□ -0.18
CTNSO60931 AC010141.1-201ENST00000411585 623 ntBASIC13.9□□□□□ -0.18
CTNSO60931 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 AL035414.1-201ENST00000451327 857 ntBASIC13.9□□□□□ -0.18
CTNSO60931 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.9□□□□□ -0.18
CTNSO60931 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.9□□□□□ -0.18
CTNSO60931 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 RN7SL560P-201ENST00000577943 264 ntBASIC13.9□□□□□ -0.18
CTNSO60931 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.9□□□□□ -0.18
CTNSO60931 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 AC009542.2-202ENST00000619004 1067 ntBASIC13.9□□□□□ -0.18
CTNSO60931 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.9□□□□□ -0.18
CTNSO60931 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.9□□□□□ -0.18
CTNSO60931 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.9□□□□□ -0.18
CTNSO60931 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTNSO60931 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTNSO60931 AC113367.3-201ENST00000508316 1912 ntBASIC13.9□□□□□ -0.18
CTNSO60931 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CTNSO60931 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CTNSO60931 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.19
CTNSO60931 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CTNSO60931 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.89□□□□□ -0.19
CTNSO60931 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.89□□□□□ -0.19
CTNSO60931 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.89□□□□□ -0.19
CTNSO60931 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTNSO60931 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
CTNSO60931 AC244107.1-201ENST00000442033 332 ntBASIC13.89□□□□□ -0.19
CTNSO60931 Z93015.1-201ENST00000451718 390 ntBASIC13.89□□□□□ -0.19
CTNSO60931 AC103988.2-201ENST00000561804 725 ntBASIC13.89□□□□□ -0.19
CTNSO60931 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CTNSO60931 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.89□□□□□ -0.19
CTNSO60931 AC027601.3-201ENST00000622907 509 ntBASIC13.89□□□□□ -0.19
CTNSO60931 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms