Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.21□□□□□ -0.61
SNAI2O43623 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 LILRP1-201ENST00000444199 1370 ntBASIC11.21□□□□□ -0.61
SNAI2O43623 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.21□□□□□ -0.61
SNAI2O43623 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SNAI2O43623 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SNAI2O43623 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.21□□□□□ -0.61
SNAI2O43623 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.21□□□□□ -0.61
SNAI2O43623 TIMM8BP1-201ENST00000452384 211 ntBASIC11.21□□□□□ -0.61
SNAI2O43623 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
SNAI2O43623 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.21□□□□□ -0.61
SNAI2O43623 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.21□□□□□ -0.61
SNAI2O43623 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.21□□□□□ -0.61
SNAI2O43623 FAM197Y3-203ENST00000618346 717 ntBASIC11.21□□□□□ -0.61
SNAI2O43623 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNAI2O43623 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
SNAI2O43623 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SNAI2O43623 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.21□□□□□ -0.62
SNAI2O43623 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.21□□□□□ -0.62
SNAI2O43623 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SNAI2O43623 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.21□□□□□ -0.62
SNAI2O43623 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.21□□□□□ -0.62
SNAI2O43623 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.21□□□□□ -0.62
SNAI2O43623 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNAI2O43623 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SNAI2O43623 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SNAI2O43623 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SNAI2O43623 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 AL592309.1-201ENST00000443127 649 ntBASIC11.2□□□□□ -0.62
SNAI2O43623 KRT18P3-201ENST00000451602 1288 ntBASIC11.2□□□□□ -0.62
SNAI2O43623 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.2□□□□□ -0.62
SNAI2O43623 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.2□□□□□ -0.62
SNAI2O43623 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 AC027601.4-201ENST00000611259 610 ntBASIC11.2□□□□□ -0.62
SNAI2O43623 AC018529.1-201ENST00000613063 361 ntBASIC11.2□□□□□ -0.62
SNAI2O43623 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.2□□□□□ -0.62
SNAI2O43623 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNAI2O43623 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.2□□□□□ -0.62
SNAI2O43623 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms