Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AC005014.1-201ENST00000432006 2976 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 DRD5P1-201ENST00000456605 1438 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 AC015688.4-201ENST00000580780 1647 ntBASIC12.95□□□□□ -0.34
SHISA3A0PJX4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SHISA3A0PJX4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AL136172.1-201ENST00000598590 1394 ntBASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 CEND1P1-201ENST00000451006 455 ntBASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 TEX28P1-201ENST00000613479 1221 ntBASIC12.94□□□□□ -0.34
SHISA3A0PJX4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 TEX28P2-201ENST00000617764 1221 ntBASIC12.94□□□□□ -0.34
SHISA3A0PJX4 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SHISA3A0PJX4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AL138799.1-201ENST00000448213 1675 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AC003102.2-201ENST00000589195 1469 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms