Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AC055811.4-201ENST00000624039 1754 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AL731571.1-201ENST00000617058 5428 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 MIR661-201ENST00000384842 89 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 KLF2P2-201ENST00000416807 1039 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 API5-211ENST00000534695 560 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 ENPP7P5-201ENST00000541031 1031 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AC018665.1-201ENST00000622927 1362 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 AC140479.7-201ENST00000636301 2332 ntBASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 POLD4-211ENST00000539074 714 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 GREM1-201ENST00000560677 623 ntTSL 4 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 AP005019.2-201ENST00000615104 511 ntBASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TRGV1A0A0A0MS02 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms