Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 MIR639-201ENST00000384974 98 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 PNN-205ENST00000556530 601 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 KRT18P8-201ENST00000581937 1246 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CYP2T3P-201ENST00000601990 817 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 MIR4787-201ENST00000607364 84 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 AC233992.3-201ENST00000607491 485 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 EVL-203ENST00000544450 3704 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 AC004623.1-201ENST00000624592 2127 ntBASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 OTOF-205ENST00000403946 6937 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 RPL5P21-201ENST00000404620 815 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AC104758.3-203ENST00000562938 2123 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 AC109462.3-201ENST00000573934 613 ntBASIC7.38□□□□□ -1.23
CDC42SE1Q9NRR8 SIGLEC29P-201ENST00000599873 1114 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms