Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ELF3-203ENST00000367284 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AL513480.1-201ENST00000451731 511 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AP002469.2-201ENST00000531724 424 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AC133552.4-201ENST00000576103 676 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 AC092171.5-201ENST00000608012 942 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.8■□□□□ 0.44
RTN4Q9NQC3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 EMBP1-201ENST00000458200 901 ntBASIC17.79■□□□□ 0.44
RTN4Q9NQC3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 AL121912.1-201ENST00000603683 238 ntBASIC17.79■□□□□ 0.44
RTN4Q9NQC3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 FAM215A-202ENST00000632077 792 ntBASIC17.79■□□□□ 0.44
RTN4Q9NQC3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTN4Q9NQC3 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC018529.2-202ENST00000611482 3087 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms