Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC093752.3-201ENST00000567343 901 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 AC092171.5-201ENST00000608012 942 ntBASIC16.47■□□□□ 0.23
VTA1Q9NP79 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.47■□□□□ 0.23
VTA1Q9NP79 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VTA1Q9NP79 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 MIR557-201ENST00000385239 98 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 RPSAP31-201ENST00000416648 895 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 DUTP3-201ENST00000450025 415 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 AC130709.1-201ENST00000484779 1212 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 AC005632.3-201ENST00000605544 308 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 AC087045.2-201ENST00000606279 1003 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 YRDCP1-201ENST00000621419 643 ntBASIC16.46■□□□□ 0.23
VTA1Q9NP79 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VTA1Q9NP79 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.46■□□□□ 0.23
VTA1Q9NP79 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VTA1Q9NP79 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
VTA1Q9NP79 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 AP000356.3-201ENST00000382243 753 ntBASIC16.45■□□□□ 0.22
VTA1Q9NP79 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 RPS9P1-201ENST00000419943 583 ntBASIC16.45■□□□□ 0.22
VTA1Q9NP79 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 AC242376.2-201ENST00000619355 883 ntBASIC16.45■□□□□ 0.22
VTA1Q9NP79 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 AC068587.6-202ENST00000641839 5619 ntBASIC16.45■□□□□ 0.22
VTA1Q9NP79 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTA1Q9NP79 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms