Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 KRT8P24-201ENST00000560290 1559 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC084121.4-201ENST00000641598 221 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AL645728.2-202ENST00000641679 227 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AF228730.8-201ENST00000642140 221 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC016397.2-201ENST00000624848 1985 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.02□□□□□ -0.8
SND1-IT1Q9HBX3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AL133267.1-201ENST00000398220 340 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 SPDYE17-201ENST00000412399 783 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC009078.2-202ENST00000463353 338 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC069335.1-201ENST00000489972 472 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 MIR497HG-202ENST00000572453 3838 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC027601.4-201ENST00000611259 610 ntBASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.02□□□□□ -0.81
SND1-IT1Q9HBX3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms