Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AP001267.2-201ENST00000532619 2086 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC005225.4-201ENST00000557330 545 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC009486.1-201ENST00000569860 813 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC005252.2-201ENST00000624630 1141 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AC092135.3-201ENST00000624151 1846 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 AL359881.3-201ENST00000602640 1721 ntBASIC14.12□□□□□ -0.15
COL21A1Q96P44 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.12□□□□□ -0.15
COL21A1Q96P44 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL21A1Q96P44 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 ACKR1-201ENST00000368121 1240 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 NME2P1-201ENST00000426182 414 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 INE1-201ENST00000456273 945 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 RN7SL837P-201ENST00000463010 287 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 AC012645.4-201ENST00000610691 1061 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 MBLAC2-202ENST00000514906 1936 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 AL158070.2-201ENST00000623713 1621 ntBASIC14.11□□□□□ -0.15
COL21A1Q96P44 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
COL21A1Q96P44 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL21A1Q96P44 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AL137783.1-201ENST00000623494 1896 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms