Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC254562.1-201ENST00000417586 456 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC109322.1-201ENST00000524499 1264 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC069262.1-201ENST00000539058 672 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AL512361.1-201ENST00000554200 418 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 Z97205.2-201ENST00000564697 1639 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC134684.3-201ENST00000641758 218 ntBASIC13.26□□□□□ -0.29
RFT1Q96AA3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RFT1Q96AA3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFT1Q96AA3 AC015909.5-201ENST00000624336 2266 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC015818.8-201ENST00000587907 1519 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 KRT8P22-201ENST00000562317 1415 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC015922.1-201ENST00000421102 1152 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC025181.2-201ENST00000606994 802 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AL109936.8-201ENST00000641772 604 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC016397.2-201ENST00000624848 1985 ntBASIC13.25□□□□□ -0.29
RFT1Q96AA3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms