Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPGRQ92834 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.12■□□□□ 0.49
RPGRQ92834 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RPGRQ92834 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPGRQ92834 TMBIM7P-203ENST00000641617 1718 ntBASIC18.12■□□□□ 0.49
RPGRQ92834 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.12■□□□□ 0.49
RPGRQ92834 AC092135.3-201ENST00000624151 1846 ntBASIC18.12■□□□□ 0.49
RPGRQ92834 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 AC008894.3-201ENST00000624324 3103 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.11■□□□□ 0.49
RPGRQ92834 PIN4P1-201ENST00000451079 396 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.11■□□□□ 0.49
RPGRQ92834 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 AC107464.3-201ENST00000609172 737 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 AL022334.2-201ENST00000610000 484 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RPGRQ92834 AC009560.1-201ENST00000620208 434 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 AC073911.3-201ENST00000624401 631 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.11■□□□□ 0.49
RPGRQ92834 AL590440.2-201ENST00000641973 1595 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 MARK2P16-201ENST00000605714 1723 ntBASIC18.11■□□□□ 0.49
RPGRQ92834 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RPGRQ92834 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RPGRQ92834 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RPGRQ92834 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.11■□□□□ 0.49
RPGRQ92834 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPGRQ92834 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.1■□□□□ 0.49
RPGRQ92834 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.1■□□□□ 0.49
RPGRQ92834 AC097065.1-201ENST00000425737 517 ntBASIC18.1■□□□□ 0.49
RPGRQ92834 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.1■□□□□ 0.49
RPGRQ92834 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.1■□□□□ 0.49
RPGRQ92834 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.1■□□□□ 0.49
RPGRQ92834 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RPGRQ92834 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.1■□□□□ 0.49
RPGRQ92834 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPGRQ92834 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.1■□□□□ 0.49
RPGRQ92834 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.09■□□□□ 0.49
RPGRQ92834 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.09■□□□□ 0.49
RPGRQ92834 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPGRQ92834 ORAOV1P1-201ENST00000503108 395 ntBASIC18.09■□□□□ 0.49
RPGRQ92834 MRPL22P1-201ENST00000505398 616 ntBASIC18.09■□□□□ 0.49
RPGRQ92834 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms