Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDM1BQ8NB78 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SHC1P1-201ENST00000425230 1745 ntBASIC15.15■□□□□ 0.02
KDM1BQ8NB78 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.15■□□□□ 0.02
KDM1BQ8NB78 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SERPINA13P-202ENST00000478994 924 ntBASIC15.15■□□□□ 0.02
KDM1BQ8NB78 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 AC020914.3-201ENST00000594712 304 ntBASIC15.15■□□□□ 0.02
KDM1BQ8NB78 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 AC067930.6-201ENST00000623257 4947 ntBASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.15■□□□□ 0.02
KDM1BQ8NB78 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 DUX4L46-201ENST00000566845 751 ntBASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AC009955.4-201ENST00000597192 544 ntBASIC15.14■□□□□ 0.01
KDM1BQ8NB78 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
KDM1BQ8NB78 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms