Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AGGF1P1-201ENST00000509500 2073 ntBASIC13.52□□□□□ -0.25
SHFQ7M4L6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 COL6A4P2-202ENST00000504443 2753 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC105206.1-202ENST00000314927 2368 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 BTBD7P1-201ENST00000447253 1453 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AL139400.1-201ENST00000366220 510 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 KRT18P13-201ENST00000400056 1290 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC114501.2-201ENST00000439631 535 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 CR383656.2-201ENST00000548656 2254 ntBASIC13.51□□□□□ -0.25
SHFQ7M4L6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SHFQ7M4L6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHFQ7M4L6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms