Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.63■□□□□ 0.41
CTR9Q6PD62 AC018529.2-202ENST00000611482 3087 ntBASIC17.63■□□□□ 0.41
CTR9Q6PD62 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTR9Q6PD62 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 PUDPP3-201ENST00000445368 636 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 KLF2P1-201ENST00000447438 1042 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 RNMTL1P1-201ENST00000454103 560 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 CICP12-201ENST00000455801 843 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 AC132192.2-201ENST00000596206 1147 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 AL451050.2-201ENST00000606967 682 ntBASIC17.62■□□□□ 0.41
CTR9Q6PD62 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTR9Q6PD62 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTR9Q6PD62 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.61■□□□□ 0.41
CTR9Q6PD62 SERPINA13P-202ENST00000478994 924 ntBASIC17.61■□□□□ 0.41
CTR9Q6PD62 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 KRT8P29-201ENST00000420409 1371 ntBASIC17.61■□□□□ 0.41
CTR9Q6PD62 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTR9Q6PD62 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTR9Q6PD62 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 NKAIN1P1-201ENST00000435754 582 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 AC021723.1-201ENST00000486306 515 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms