Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFWD3Q6PCD5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ACE3P-201ENST00000423435 1973 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 TUBB1P2-201ENST00000422712 1306 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 FKBP4P6-201ENST00000457486 1332 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 TUBB1P1-201ENST00000503144 1300 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 FAM86MP-201ENST00000340703 885 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CNN2P10-201ENST00000443067 918 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MESTP3-201ENST00000503460 968 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 C2orf69P2-201ENST00000562032 1123 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MIR4538-201ENST00000581377 78 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AC073413.1-201ENST00000603927 732 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MIR6799-201ENST00000620297 69 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.53■□□□□ 0.08
RFWD3Q6PCD5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 BRWD1P1-201ENST00000401091 371 ntBASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 FTLP10-202ENST00000505798 471 ntBASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 RN7SL219P-201ENST00000582872 296 ntBASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.52■□□□□ 0.08
RFWD3Q6PCD5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms