Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AL596276.2-201ENST00000447525 331 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 SORD2P-201ENST00000558556 1069 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 DUX4L46-201ENST00000566845 751 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 RN7SL774P-201ENST00000577467 290 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AP000346.4-201ENST00000614827 381 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RFX7Q2KHR2 Z98259.2-201ENST00000641583 609 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 AC004923.1-202ENST00000642106 209 ntBASIC17.79■□□□□ 0.44
RFX7Q2KHR2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 RN7SL11P-201ENST00000471305 293 ntBASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AC021723.1-201ENST00000486306 515 ntBASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 AC016629.1-201ENST00000596579 586 ntBASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX7Q2KHR2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 AL513477.1-201ENST00000602865 2407 ntBASIC17.77■□□□□ 0.44
RFX7Q2KHR2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX7Q2KHR2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AC091046.1-201ENST00000331871 207 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 MIR769-201ENST00000390225 118 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AL645933.1-201ENST00000440087 609 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AC090164.2-201ENST00000611487 516 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AC100757.4-201ENST00000626934 759 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 AC244394.1-201ENST00000435000 1665 ntBASIC17.77■□□□□ 0.43
RFX7Q2KHR2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms