Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 CYP4F23P-201ENST00000593402 1579 ntBASIC20.03■□□□□ 0.8
CGNL1Q0VF96 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 RN7SL720P-201ENST00000488178 304 ntBASIC20.02■□□□□ 0.8
CGNL1Q0VF96 IMP3P2-201ENST00000489760 475 ntBASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AC245884.6-201ENST00000515672 1067 ntBASIC20.02■□□□□ 0.8
CGNL1Q0VF96 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 RBM8B-201ENST00000555532 525 ntBASIC20.02■□□□□ 0.8
CGNL1Q0VF96 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 AC006504.5-208ENST00000588784 2401 ntBASIC20.02■□□□□ 0.8
CGNL1Q0VF96 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CGNL1Q0VF96 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 MAGEA5-201ENST00000446757 942 ntBASIC20.02■□□□□ 0.79
CGNL1Q0VF96 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 RN7SL774P-201ENST00000577467 290 ntBASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AC091544.8-201ENST00000619490 361 ntBASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AC133540.1-201ENST00000620845 1019 ntBASIC20.02■□□□□ 0.79
CGNL1Q0VF96 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CGNL1Q0VF96 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 AL133466.1-201ENST00000447582 150 ntBASIC20.01■□□□□ 0.79
CGNL1Q0VF96 RCC2P8-201ENST00000502779 1035 ntBASIC20.01■□□□□ 0.79
CGNL1Q0VF96 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGNL1Q0VF96 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20■□□□□ 0.79
CGNL1Q0VF96 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGNL1Q0VF96 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20■□□□□ 0.79
CGNL1Q0VF96 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGNL1Q0VF96 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20■□□□□ 0.79
CGNL1Q0VF96 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGNL1Q0VF96 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20■□□□□ 0.79
CGNL1Q0VF96 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGNL1Q0VF96 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20■□□□□ 0.79
CGNL1Q0VF96 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CGNL1Q0VF96 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms