Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 LINC01230-201ENST00000625222 3017 ntBASIC12.05□□□□□ -0.48
CX3CL1P78423 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.05□□□□□ -0.48
CX3CL1P78423 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.05□□□□□ -0.48
CX3CL1P78423 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.05□□□□□ -0.48
CX3CL1P78423 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 RN7SL692P-201ENST00000464677 288 ntBASIC12.05□□□□□ -0.48
CX3CL1P78423 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 AC022616.1-201ENST00000518688 554 ntBASIC12.05□□□□□ -0.48
CX3CL1P78423 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.05□□□□□ -0.48
CX3CL1P78423 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.05□□□□□ -0.48
CX3CL1P78423 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CX3CL1P78423 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.05□□□□□ -0.48
CX3CL1P78423 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 HSPA7-201ENST00000445535 1927 ntBASIC12.05□□□□□ -0.48
CX3CL1P78423 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CX3CL1P78423 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CX3CL1P78423 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CX3CL1P78423 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 BX640514.1-201ENST00000583223 1918 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.04□□□□□ -0.48
CX3CL1P78423 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CX3CL1P78423 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CX3CL1P78423 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.04□□□□□ -0.48
CX3CL1P78423 ACTG1P3-201ENST00000431775 1114 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.04□□□□□ -0.48
CX3CL1P78423 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC022137.2-201ENST00000503482 481 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AP005018.1-201ENST00000525475 301 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AL596325.1-201ENST00000563991 1082 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC010319.3-201ENST00000597028 470 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 LRRC59-203ENST00000576448 1531 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 AC027601.5-201ENST00000624065 2482 ntBASIC12.04□□□□□ -0.48
CX3CL1P78423 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms