Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 MIR658-201ENST00000385210 100 ntBASIC16.07■□□□□ 0.16
SNRPFP62306 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.07■□□□□ 0.16
SNRPFP62306 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.07■□□□□ 0.16
SNRPFP62306 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 AC015818.8-201ENST00000587907 1519 ntBASIC16.07■□□□□ 0.16
SNRPFP62306 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SNRPFP62306 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.07■□□□□ 0.16
SNRPFP62306 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SNRPFP62306 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.06■□□□□ 0.16
SNRPFP62306 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.06■□□□□ 0.16
SNRPFP62306 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.06■□□□□ 0.16
SNRPFP62306 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.06■□□□□ 0.16
SNRPFP62306 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SNRPFP62306 ATP5G2P4-201ENST00000442175 420 ntBASIC16.06■□□□□ 0.16
SNRPFP62306 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.06■□□□□ 0.16
SNRPFP62306 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.06■□□□□ 0.16
SNRPFP62306 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.06■□□□□ 0.16
SNRPFP62306 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.06■□□□□ 0.16
SNRPFP62306 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
SNRPFP62306 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 AC097359.2-201ENST00000604992 2389 ntBASIC16.06■□□□□ 0.16
SNRPFP62306 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNRPFP62306 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.06■□□□□ 0.16
SNRPFP62306 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.06■□□□□ 0.16
SNRPFP62306 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRPFP62306 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 OR2I1P-209ENST00000641730 5365 ntBASIC16.05■□□□□ 0.16
SNRPFP62306 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SNRPFP62306 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRPFP62306 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRPFP62306 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRPFP62306 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
SNRPFP62306 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRPFP62306 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.05■□□□□ 0.16
SNRPFP62306 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRPFP62306 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRPFP62306 AL354877.1-201ENST00000424412 413 ntBASIC16.05■□□□□ 0.16
SNRPFP62306 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRPFP62306 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRPFP62306 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.05■□□□□ 0.16
SNRPFP62306 AC005586.2-201ENST00000563946 837 ntBASIC16.05■□□□□ 0.16
SNRPFP62306 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms