Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KDM5CP41229 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC21.59■■□□□ 1.05
KDM5CP41229 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC21.59■■□□□ 1.05
KDM5CP41229 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
KDM5CP41229 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KDM5CP41229 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.59■■□□□ 1.05
KDM5CP41229 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.59■■□□□ 1.05
KDM5CP41229 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KDM5CP41229 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KDM5CP41229 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.58■■□□□ 1.05
KDM5CP41229 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
KDM5CP41229 RPL3P5-201ENST00000441645 1232 ntBASIC21.58■■□□□ 1.05
KDM5CP41229 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KDM5CP41229 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC21.58■■□□□ 1.05
KDM5CP41229 ALG1L7P-201ENST00000502317 768 ntBASIC21.58■■□□□ 1.05
KDM5CP41229 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KDM5CP41229 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC21.58■■□□□ 1.05
KDM5CP41229 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
KDM5CP41229 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KDM5CP41229 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KDM5CP41229 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
KDM5CP41229 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KDM5CP41229 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KDM5CP41229 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
KDM5CP41229 RPL3P2-204ENST00000413027 1203 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 HLA-DPA2-205ENST00000433582 733 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
KDM5CP41229 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC21.57■■□□□ 1.04
KDM5CP41229 SNORD3B-1-201ENST00000577988 758 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 MIR5001-201ENST00000580185 100 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 AC046158.3-201ENST00000624947 2558 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM5CP41229 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM5CP41229 RN7SL788P-201ENST00000460504 316 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.57■■□□□ 1.04
KDM5CP41229 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.57■■□□□ 1.04
KDM5CP41229 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
KDM5CP41229 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC21.57■■□□□ 1.04
KDM5CP41229 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.57■■□□□ 1.04
KDM5CP41229 AP000769.1-203ENST00000637245 208 ntBASIC21.57■■□□□ 1.04
KDM5CP41229 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM5CP41229 AC091951.1-201ENST00000512854 2465 ntBASIC21.56■■□□□ 1.04
KDM5CP41229 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.56■■□□□ 1.04
KDM5CP41229 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
KDM5CP41229 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
KDM5CP41229 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
KDM5CP41229 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.56■■□□□ 1.04
KDM5CP41229 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.56■■□□□ 1.04
KDM5CP41229 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
KDM5CP41229 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.56■■□□□ 1.04
KDM5CP41229 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC21.56■■□□□ 1.04
KDM5CP41229 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.56■■□□□ 1.04
KDM5CP41229 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms