Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 AL445209.1-201ENST00000607269 3491 ntBASIC14.96□□□□□ -0.01
MDH1P40925 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.96□□□□□ -0.01
MDH1P40925 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.96□□□□□ -0.01
MDH1P40925 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.96□□□□□ -0.01
MDH1P40925 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.96□□□□□ -0.01
MDH1P40925 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
MDH1P40925 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MDH1P40925 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.96□□□□□ -0.02
MDH1P40925 AL121723.1-201ENST00000445194 1519 ntBASIC14.96□□□□□ -0.02
MDH1P40925 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.96□□□□□ -0.02
MDH1P40925 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
MDH1P40925 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.96□□□□□ -0.02
MDH1P40925 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
MDH1P40925 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
MDH1P40925 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.96□□□□□ -0.02
MDH1P40925 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
MDH1P40925 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
MDH1P40925 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 AL671277.1-201ENST00000429656 993 ntBASIC14.95□□□□□ -0.02
MDH1P40925 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 KRT18P43-201ENST00000469825 1281 ntBASIC14.95□□□□□ -0.02
MDH1P40925 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.95□□□□□ -0.02
MDH1P40925 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.95□□□□□ -0.02
MDH1P40925 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
MDH1P40925 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 BANF1P1-201ENST00000553684 263 ntBASIC14.95□□□□□ -0.02
MDH1P40925 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 AC034105.1-201ENST00000563488 319 ntBASIC14.95□□□□□ -0.02
MDH1P40925 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
MDH1P40925 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 AGAP12P-201ENST00000585227 2359 ntBASIC14.95□□□□□ -0.02
MDH1P40925 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MDH1P40925 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.95□□□□□ -0.02
MDH1P40925 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.95□□□□□ -0.02
MDH1P40925 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms