Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC010234.1-201ENST00000494599 870 ntBASIC18.7■□□□□ 0.58
ATP6V1AP38606 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC026691.1-201ENST00000602502 2017 ntBASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC138466.4-201ENST00000623965 852 ntBASIC18.7■□□□□ 0.58
ATP6V1AP38606 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 SSR4P1-203ENST00000599569 2260 ntBASIC18.7■□□□□ 0.58
ATP6V1AP38606 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V1AP38606 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V1AP38606 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 AC124068.2-201ENST00000569473 1109 ntBASIC18.69■□□□□ 0.58
ATP6V1AP38606 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V1AP38606 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 AC026410.1-201ENST00000507366 1101 ntBASIC18.68■□□□□ 0.58
ATP6V1AP38606 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 AC084752.1-201ENST00000509766 622 ntBASIC18.68■□□□□ 0.58
ATP6V1AP38606 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.68■□□□□ 0.58
ATP6V1AP38606 HERC2P11-201ENST00000562845 725 ntBASIC18.68■□□□□ 0.58
ATP6V1AP38606 AC100756.2-201ENST00000569537 736 ntBASIC18.68■□□□□ 0.58
ATP6V1AP38606 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP6V1AP38606 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V1AP38606 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms