Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.65□□□□□ -0.54
CD28P10747 UPF3AP2-201ENST00000457924 1132 ntBASIC11.65□□□□□ -0.54
CD28P10747 RN7SL11P-201ENST00000471305 293 ntBASIC11.65□□□□□ -0.54
CD28P10747 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.65□□□□□ -0.54
CD28P10747 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.65□□□□□ -0.54
CD28P10747 AC106794.1-201ENST00000506935 792 ntBASIC11.65□□□□□ -0.54
CD28P10747 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC11.65□□□□□ -0.54
CD28P10747 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.65□□□□□ -0.54
CD28P10747 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.65□□□□□ -0.54
CD28P10747 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.65□□□□□ -0.54
CD28P10747 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CD28P10747 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.65□□□□□ -0.54
CD28P10747 AC100827.2-201ENST00000563214 1194 ntBASIC11.65□□□□□ -0.54
CD28P10747 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.65□□□□□ -0.54
CD28P10747 AC106872.11-201ENST00000605838 421 ntBASIC11.65□□□□□ -0.54
CD28P10747 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.65□□□□□ -0.54
CD28P10747 AC138627.1-207ENST00000641560 1006 ntBASIC11.65□□□□□ -0.54
CD28P10747 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD28P10747 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD28P10747 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.65□□□□□ -0.54
CD28P10747 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD28P10747 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD28P10747 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.65□□□□□ -0.54
CD28P10747 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.65□□□□□ -0.55
CD28P10747 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD28P10747 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.65□□□□□ -0.55
CD28P10747 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.65□□□□□ -0.55
CD28P10747 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.65□□□□□ -0.55
CD28P10747 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
CD28P10747 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD28P10747 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CD28P10747 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
CD28P10747 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.65□□□□□ -0.55
CD28P10747 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.64□□□□□ -0.55
CD28P10747 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.64□□□□□ -0.55
CD28P10747 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.64□□□□□ -0.55
CD28P10747 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.64□□□□□ -0.55
CD28P10747 HLA-DPB2-205ENST00000435074 1188 ntBASIC11.64□□□□□ -0.55
CD28P10747 Z97180.1-201ENST00000445173 988 ntBASIC11.64□□□□□ -0.55
CD28P10747 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
CD28P10747 AC138696.2-201ENST00000607376 223 ntBASIC11.64□□□□□ -0.55
CD28P10747 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
CD28P10747 AC022748.3-201ENST00000621828 275 ntBASIC11.64□□□□□ -0.55
CD28P10747 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.64□□□□□ -0.55
CD28P10747 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 AC073347.1-201ENST00000421633 2643 ntBASIC11.64□□□□□ -0.55
CD28P10747 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD28P10747 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CD28P10747 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms