Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.95□□□□□ -0.02
APOA4P06727 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.95□□□□□ -0.02
APOA4P06727 AC093433.1-201ENST00000458048 571 ntBASIC14.95□□□□□ -0.02
APOA4P06727 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 AC022616.1-201ENST00000518688 554 ntBASIC14.95□□□□□ -0.02
APOA4P06727 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.95□□□□□ -0.02
APOA4P06727 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.95□□□□□ -0.02
APOA4P06727 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
APOA4P06727 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.95□□□□□ -0.02
APOA4P06727 LRRC59-203ENST00000576448 1531 ntBASIC14.95□□□□□ -0.02
APOA4P06727 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
APOA4P06727 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.95□□□□□ -0.02
APOA4P06727 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOA4P06727 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
APOA4P06727 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.94□□□□□ -0.02
APOA4P06727 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.94□□□□□ -0.02
APOA4P06727 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
APOA4P06727 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.94□□□□□ -0.02
APOA4P06727 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.94□□□□□ -0.02
APOA4P06727 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 ACTG1P3-201ENST00000431775 1114 ntBASIC14.94□□□□□ -0.02
APOA4P06727 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.94□□□□□ -0.02
APOA4P06727 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOA4P06727 PTP4A1P2-201ENST00000546033 454 ntBASIC14.94□□□□□ -0.02
APOA4P06727 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.94□□□□□ -0.02
APOA4P06727 AL596325.1-201ENST00000563991 1082 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms