Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TCRAP04437 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CICP16-201ENST00000502609 2813 ntBASIC11.36□□□□□ -0.59
TCRAP04437 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 AC099521.3-201ENST00000624251 2938 ntBASIC11.36□□□□□ -0.59
TCRAP04437 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 AC011840.2-201ENST00000563063 1520 ntBASIC11.36□□□□□ -0.59
TCRAP04437 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 AL645937.2-201ENST00000396808 931 ntBASIC11.36□□□□□ -0.59
TCRAP04437 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.36□□□□□ -0.59
TCRAP04437 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.36□□□□□ -0.59
TCRAP04437 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.36□□□□□ -0.59
TCRAP04437 GAPDHP40-201ENST00000505218 1006 ntBASIC11.36□□□□□ -0.59
TCRAP04437 SDHAP3-202ENST00000515467 728 ntBASIC11.36□□□□□ -0.59
TCRAP04437 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.36□□□□□ -0.59
TCRAP04437 AL512361.1-201ENST00000554200 418 ntBASIC11.36□□□□□ -0.59
TCRAP04437 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.36□□□□□ -0.59
TCRAP04437 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 AC009093.7-201ENST00000623853 1223 ntBASIC11.36□□□□□ -0.59
TCRAP04437 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
TCRAP04437 AL109936.8-201ENST00000641772 604 ntBASIC11.36□□□□□ -0.59
TCRAP04437 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 MYADML-201ENST00000474610 2147 ntBASIC11.36□□□□□ -0.59
TCRAP04437 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TCRAP04437 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TCRAP04437 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.36□□□□□ -0.59
TCRAP04437 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
TCRAP04437 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TCRAP04437 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
TCRAP04437 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms