Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
POLR1AO95602 AC106827.1-201ENST00000366454 431 ntBASIC21.02■□□□□ 0.96
POLR1AO95602 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR1AO95602 RGS5-216ENST00000449680 788 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR1AO95602 TPT1P11-201ENST00000458482 498 ntBASIC21.02■□□□□ 0.96
POLR1AO95602 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1AO95602 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1AO95602 GCOM2-201ENST00000509133 1104 ntBASIC21.02■□□□□ 0.96
POLR1AO95602 IGHEP1-201ENST00000521393 651 ntBASIC21.02■□□□□ 0.96
POLR1AO95602 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1AO95602 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR1AO95602 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR1AO95602 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1AO95602 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR1AO95602 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC21.02■□□□□ 0.95
POLR1AO95602 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC21.02■□□□□ 0.95
POLR1AO95602 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
POLR1AO95602 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
POLR1AO95602 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 AC232323.1-201ENST00000540724 2099 ntBASIC21.01■□□□□ 0.95
POLR1AO95602 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
POLR1AO95602 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR1AO95602 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR1AO95602 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
POLR1AO95602 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 CTBP2P8-201ENST00000422584 1330 ntBASIC21.01■□□□□ 0.95
POLR1AO95602 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 AC004554.1-201ENST00000422830 1468 ntBASIC21.01■□□□□ 0.95
POLR1AO95602 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR1AO95602 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1AO95602 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1AO95602 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR1AO95602 VPS18-202ENST00000558474 873 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1AO95602 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR1AO95602 RN7SL665P-201ENST00000578793 300 ntBASIC21.01■□□□□ 0.95
POLR1AO95602 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
POLR1AO95602 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1AO95602 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR1AO95602 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
POLR1AO95602 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1AO95602 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21■□□□□ 0.95
POLR1AO95602 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
POLR1AO95602 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 PTGER4P2-201ENST00000328411 252 ntBASIC21■□□□□ 0.95
POLR1AO95602 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC21■□□□□ 0.95
POLR1AO95602 PTGER4P3-201ENST00000458150 252 ntBASIC21■□□□□ 0.95
POLR1AO95602 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21■□□□□ 0.95
POLR1AO95602 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 PPIA-208ENST00000489459 907 ntTSL 2 BASIC21■□□□□ 0.95
POLR1AO95602 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21■□□□□ 0.95
POLR1AO95602 MIR5001-201ENST00000580185 100 ntBASIC21■□□□□ 0.95
POLR1AO95602 PPIA-210ENST00000620047 827 ntTSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 BX640514.1-201ENST00000583223 1918 ntBASIC21■□□□□ 0.95
POLR1AO95602 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
POLR1AO95602 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1AO95602 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1AO95602 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1AO95602 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1AO95602 AC073869.2-201ENST00000417338 1026 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 AC083801.1-201ENST00000491689 358 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 AC022447.6-201ENST00000515522 438 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 AC004686.1-201ENST00000605113 538 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 AC021016.3-201ENST00000608367 477 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1AO95602 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms