Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CDKL5O76039 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDKL5O76039 RN7SKP175-201ENST00000408472 289 ntBASIC17.29■□□□□ 0.36
CDKL5O76039 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDKL5O76039 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL5O76039 FTH1P14-201ENST00000482930 551 ntBASIC17.29■□□□□ 0.36
CDKL5O76039 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.29■□□□□ 0.36
CDKL5O76039 AL391280.1-201ENST00000506969 1062 ntBASIC17.29■□□□□ 0.36
CDKL5O76039 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKL5O76039 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKL5O76039 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL5O76039 AC105233.6-201ENST00000642093 218 ntBASIC17.29■□□□□ 0.36
CDKL5O76039 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKL5O76039 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKL5O76039 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL5O76039 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL5O76039 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL5O76039 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.28■□□□□ 0.36
CDKL5O76039 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL5O76039 FAM8A4P-201ENST00000435433 1213 ntBASIC17.28■□□□□ 0.36
CDKL5O76039 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL5O76039 AL590640.2-201ENST00000457038 527 ntBASIC17.28■□□□□ 0.36
CDKL5O76039 CR383656.12-201ENST00000549567 513 ntBASIC17.28■□□□□ 0.36
CDKL5O76039 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL5O76039 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 INE2-201ENST00000630399 1874 ntBASIC17.28■□□□□ 0.36
CDKL5O76039 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL5O76039 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL5O76039 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL5O76039 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 MYADML-201ENST00000474610 2147 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKL5O76039 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDKL5O76039 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL5O76039 AL035633.1-201ENST00000406139 838 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKL5O76039 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDKL5O76039 FAM197Y7-201ENST00000432892 766 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 COX20P2-201ENST00000452636 358 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 AC007551.1-201ENST00000457394 519 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDKL5O76039 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.27■□□□□ 0.36
CDKL5O76039 KRT90P-201ENST00000549264 1064 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 AC005225.4-201ENST00000557330 545 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.27■□□□□ 0.36
CDKL5O76039 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL5O76039 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.27■□□□□ 0.36
CDKL5O76039 AC138951.2-201ENST00000623455 1161 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 AC006453.4-201ENST00000636949 1252 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CDKL5O76039 AC015688.4-201ENST00000580780 1647 ntBASIC17.27■□□□□ 0.36
CDKL5O76039 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms