Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.96□□□□□ -0.02
RFPL1O75677 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 KRT8P24-201ENST00000560290 1559 ntBASIC14.95□□□□□ -0.02
RFPL1O75677 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.95□□□□□ -0.02
RFPL1O75677 FAM86LP-201ENST00000478302 853 ntBASIC14.95□□□□□ -0.02
RFPL1O75677 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.95□□□□□ -0.02
RFPL1O75677 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.95□□□□□ -0.02
RFPL1O75677 CTBP2P3-201ENST00000585629 1255 ntBASIC14.95□□□□□ -0.02
RFPL1O75677 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RFPL1O75677 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFPL1O75677 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RFPL1O75677 AC020910.6-201ENST00000623084 1459 ntBASIC14.95□□□□□ -0.02
RFPL1O75677 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.95□□□□□ -0.02
RFPL1O75677 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 AC079781.5-202ENST00000641784 3743 ntBASIC14.94□□□□□ -0.02
RFPL1O75677 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.94□□□□□ -0.02
RFPL1O75677 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFPL1O75677 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFPL1O75677 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.94□□□□□ -0.02
RFPL1O75677 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.94□□□□□ -0.02
RFPL1O75677 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.94□□□□□ -0.02
RFPL1O75677 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RFPL1O75677 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 AL512343.1-201ENST00000605837 169 ntBASIC14.94□□□□□ -0.02
RFPL1O75677 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RFPL1O75677 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFPL1O75677 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RFPL1O75677 AL137784.3-201ENST00000623858 2288 ntBASIC14.94□□□□□ -0.02
RFPL1O75677 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RFPL1O75677 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFPL1O75677 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms