Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.32□□□□□ -0.28
CYTIPO60759 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.32□□□□□ -0.28
CYTIPO60759 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.32□□□□□ -0.28
CYTIPO60759 HOMER2P2-201ENST00000451621 847 ntBASIC13.32□□□□□ -0.28
CYTIPO60759 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.32□□□□□ -0.28
CYTIPO60759 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.32□□□□□ -0.28
CYTIPO60759 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CYTIPO60759 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.32□□□□□ -0.28
CYTIPO60759 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.32□□□□□ -0.28
CYTIPO60759 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 MIR6752-201ENST00000618442 71 ntBASIC13.32□□□□□ -0.28
CYTIPO60759 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
CYTIPO60759 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.32□□□□□ -0.28
CYTIPO60759 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CYTIPO60759 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.32□□□□□ -0.28
CYTIPO60759 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYTIPO60759 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 INE2-201ENST00000630399 1874 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 PCDHA3-202ENST00000532566 4594 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CYTIPO60759 OR2I1P-209ENST00000641730 5365 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.31□□□□□ -0.28
CYTIPO60759 FGD5P1-202ENST00000614866 2498 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.31□□□□□ -0.28
CYTIPO60759 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 AL136309.1-201ENST00000403917 691 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.31□□□□□ -0.28
CYTIPO60759 RPS2P32-201ENST00000439199 892 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.31□□□□□ -0.28
CYTIPO60759 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.31□□□□□ -0.28
CYTIPO60759 AL355994.2-201ENST00000447882 704 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.31□□□□□ -0.28
CYTIPO60759 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CYTIPO60759 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 PPY2P-201ENST00000582808 702 ntBASIC13.31□□□□□ -0.28
CYTIPO60759 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYTIPO60759 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms