Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC244157.2-201ENST00000616239 1006 ntBASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AL139099.5-201ENST00000635274 300 ntBASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AC244452.3-201ENST00000636814 210 ntBASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.58□□□□□ -0.23
NPIPA2E9PIF3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 FTLP10-202ENST00000505798 471 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC004466.1-201ENST00000599515 1080 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC073413.1-201ENST00000603927 732 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 ZACNP1-201ENST00000612259 710 ntBASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPA2E9PIF3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms