Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 MRPL37P1-201ENST00000592451 1337 ntBASIC15.82■□□□□ 0.12
RCCD1A6NED2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 RN7SKP230-201ENST00000365642 335 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 AL138725.1-201ENST00000407347 1314 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 AC092183.1-201ENST00000469884 875 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 DOC2GP-202ENST00000514950 1163 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 AC124283.3-201ENST00000570869 594 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 AP001160.2-201ENST00000596071 487 ntBASIC15.81■□□□□ 0.12
RCCD1A6NED2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCCD1A6NED2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.81■□□□□ 0.12
RCCD1A6NED2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 SPDYE19P-201ENST00000338590 713 ntBASIC15.8■□□□□ 0.12
RCCD1A6NED2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 TLE1P1-201ENST00000422965 589 ntBASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC055876.3-201ENST00000431496 288 ntBASIC15.8■□□□□ 0.12
RCCD1A6NED2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 MIR6074-201ENST00000612054 107 ntBASIC15.8■□□□□ 0.12
RCCD1A6NED2 AC138649.4-201ENST00000612222 287 ntBASIC15.8■□□□□ 0.12
RCCD1A6NED2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms