Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAPAQ9P0L0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC107918.4-201ENST00000641966 3141 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC215219.1-201ENST00000400706 1817 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC011498.7-201ENST00000624986 2027 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC007969.1-201ENST00000433675 447 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 EIF3FP3-201ENST00000434851 1086 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 TMEM198B-204ENST00000484016 896 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 TPRX2P-201ENST00000535362 881 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AL390955.2-201ENST00000603032 514 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAPAQ9P0L0 AL136172.1-201ENST00000598590 1394 ntBASIC14.09□□□□□ -0.15
VAPAQ9P0L0 INTS4P2-202ENST00000614726 2019 ntBASIC14.08□□□□□ -0.15
VAPAQ9P0L0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.08□□□□□ -0.15
VAPAQ9P0L0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VAPAQ9P0L0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VAPAQ9P0L0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC120045.2-201ENST00000567334 178 ntBASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC138761.1-201ENST00000584393 385 ntBASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AC079781.4-201ENST00000641908 219 ntBASIC14.08□□□□□ -0.16
VAPAQ9P0L0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 PTENP1-202ENST00000532280 3996 ntBASIC14.08□□□□□ -0.16
VAPAQ9P0L0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
VAPAQ9P0L0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms