Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 TMPOP1-202ENST00000424642 1267 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PRSS29P-201ENST00000440800 595 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AC021087.4-201ENST00000563761 564 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 RN7SL850P-201ENST00000579959 291 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AL732292.2-201ENST00000609649 430 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AC026992.2-203ENST00000563004 2419 ntBASIC12.1□□□□□ -0.47
NKX6-2Q9C056 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AC092474.2-201ENST00000424288 719 ntBASIC12.09□□□□□ -0.47
NKX6-2Q9C056 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 PRYP6-201ENST00000514804 343 ntBASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 OR7E14P-202ENST00000530490 1290 ntBASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 AP000550.4-202ENST00000639755 178 ntBASIC12.09□□□□□ -0.47
NKX6-2Q9C056 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
NKX6-2Q9C056 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms