Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 AC127002.1-201ENST00000619123 455 ntBASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 AC069224.1-201ENST00000566372 1715 ntBASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL25A1Q9BXS0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 APRT-202ENST00000426324 664 ntTSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 IQCF4-203ENST00000428561 420 ntBASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 LILRP1-201ENST00000444199 1370 ntBASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 AC105020.1-201ENST00000435356 2205 ntBASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.57□□□□□ -0.08
COL25A1Q9BXS0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AC103563.1-201ENST00000429316 123 ntBASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 TMEM256P1-201ENST00000430550 340 ntBASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 RN7SL275P-201ENST00000582762 335 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms