Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AL158212.4-201ENST00000624062 1286 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 MST1P2-201ENST00000457982 2291 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 LILRP1-201ENST00000444199 1370 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC083964.2-201ENST00000623988 2396 ntBASIC13.66□□□□□ -0.22
SNX18Q96RF0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.66□□□□□ -0.22
SNX18Q96RF0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNX18Q96RF0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.66□□□□□ -0.22
SNX18Q96RF0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AL360270.3-201ENST00000609118 1348 ntBASIC13.65□□□□□ -0.22
SNX18Q96RF0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms