Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 RN7SL219P-201ENST00000582872 296 ntBASIC15.34■□□□□ 0.05
RPRD1AQ96P16 AL358472.3-201ENST00000608147 415 ntBASIC15.34■□□□□ 0.05
RPRD1AQ96P16 AL136301.1-201ENST00000615830 422 ntBASIC15.34■□□□□ 0.05
RPRD1AQ96P16 AC244157.2-201ENST00000616239 1006 ntBASIC15.34■□□□□ 0.05
RPRD1AQ96P16 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPRD1AQ96P16 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 AC007292.2-201ENST00000593524 1812 ntBASIC15.33■□□□□ 0.05
RPRD1AQ96P16 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 CICP14-201ENST00000629111 2732 ntBASIC15.33■□□□□ 0.05
RPRD1AQ96P16 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
RPRD1AQ96P16 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 MIR1908-201ENST00000410394 80 ntBASIC15.33■□□□□ 0.04
RPRD1AQ96P16 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 GCOM2-201ENST00000509133 1104 ntBASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AP001002.3-201ENST00000623482 206 ntBASIC15.33■□□□□ 0.04
RPRD1AQ96P16 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 AL136172.1-201ENST00000598590 1394 ntBASIC15.33■□□□□ 0.04
RPRD1AQ96P16 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RPRD1AQ96P16 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.32■□□□□ 0.04
RPRD1AQ96P16 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 GOLGA2P4-201ENST00000441462 777 ntBASIC15.32■□□□□ 0.04
RPRD1AQ96P16 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RPSAP36-202ENST00000494591 1261 ntBASIC15.32■□□□□ 0.04
RPRD1AQ96P16 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AC100850.1-201ENST00000506768 649 ntBASIC15.32■□□□□ 0.04
RPRD1AQ96P16 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms