Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 BAATP1-201ENST00000412284 1225 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 MESTP3-201ENST00000503460 968 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 TERF1P3-201ENST00000505638 1227 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 TDH-203ENST00000531764 1110 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 ECM1P1-201ENST00000604092 1279 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 AP001002.3-201ENST00000623482 206 ntBASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CPNE8Q86YQ8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 TLE1P1-201ENST00000422965 589 ntBASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 AC245100.3-201ENST00000441281 285 ntBASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 RN7SL837P-201ENST00000463010 287 ntBASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 AP001889.1-201ENST00000525414 633 ntBASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 AC068587.3-201ENST00000526613 355 ntBASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE8Q86YQ8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 HSPA8P5-201ENST00000456928 2069 ntBASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 AC020910.6-201ENST00000623084 1459 ntBASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE8Q86YQ8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms