Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AZGP1P1-201ENST00000411909 902 ntBASIC13.33□□□□□ -0.28
LRRC28Q86X40 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 COX20P2-201ENST00000452636 358 ntBASIC13.33□□□□□ -0.28
LRRC28Q86X40 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AC074044.1-201ENST00000609673 707 ntBASIC13.33□□□□□ -0.28
LRRC28Q86X40 AC004461.2-201ENST00000629517 803 ntBASIC13.33□□□□□ -0.28
LRRC28Q86X40 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AC015818.8-201ENST00000587907 1519 ntBASIC13.33□□□□□ -0.28
LRRC28Q86X40 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC28Q86X40 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC28Q86X40 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 Z97205.2-201ENST00000564697 1639 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 AL035633.1-201ENST00000406139 838 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 TMEM198B-204ENST00000484016 896 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 SRD5A3P1-201ENST00000603021 949 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC28Q86X40 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 AC016397.2-201ENST00000624848 1985 ntBASIC13.32□□□□□ -0.28
LRRC28Q86X40 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC28Q86X40 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms