Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 RPL3P5-201ENST00000441645 1232 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 OR2A1-AS1-210ENST00000496968 531 ntBASIC10.07□□□□□ -0.8
CSMD3Q7Z407 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.07□□□□□ -0.8
CSMD3Q7Z407 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AC019109.1-201ENST00000401725 1874 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ST13P19-201ENST00000442505 1124 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 MED11-202ENST00000573708 802 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AP000322.3-201ENST00000608665 388 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AGGF1P1-201ENST00000509500 2073 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 OR8T1P-201ENST00000421347 918 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 RN7SL530P-201ENST00000485097 298 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 IGHEP2-201ENST00000519308 1256 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CTBP2P6-201ENST00000526402 1229 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PSME2-217ENST00000615264 874 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ST5-261ENST00000626808 1071 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PSME2-218ENST00000630027 185 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AP005117.1-202ENST00000581724 1908 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 IGKV1OR-2-201ENST00000457995 350 ntBASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CSMD3Q7Z407 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CSMD3Q7Z407 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CSMD3Q7Z407 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CSMD3Q7Z407 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.05□□□□□ -0.8
CSMD3Q7Z407 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CSMD3Q7Z407 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms